Update
Intro Story: (goes with picture attached)
Once ago, in a land named Hyrule, the peoples that one lived there were blessed by the power of the Gods. They worshiped the item left there by the Godesses that created the land as a god in itself.
But one day, a shadow passed over the land, spreading a cloak of darkness over it and causing great catastrophe for it's people. But then, as hope seemed to have been almost lost, a hero in green appeared as if from nowhere, and wielded the blade of evil's bane, and smite the shadow into darkness, saving the land of Hyrule. Then the hero of time fell into shadow, and all memories of him after this are lost. Thousands of years later, another shadow passed over the now flooded Hyrule, but a child, identical to the hero of the time appeared, and plunged the blade of the ancient hero into the shadow, turning him into stone, and saving the new Hyrule- once again. However, this time, the hero left to the great sea, looking for new adventures. But during one of these, his boat was attacked by a shadow, perhaps awakened by anger after years of plotting his revenge. This hero was then lost from the minds of all who knew him. However, this legend will remain on the wind's breath, for many generations to come.
Basically, this game runs on an alternative timeline to Phantom Hourglass (and all games after it)